Gb_22724


Description : Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana (sp|q9sz52|pp344_arath : 1007.0)


Gene families : OG_01_0008852 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008852_tree ,
OG_02_0008546 (LandPlants) Phylogenetic Tree(s): OG_02_0008546_tree ,
OG_03_0005697 (SeedPlants) Phylogenetic Tree(s): OG_03_0005697_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22724
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AT4G31850 PGR3 proton gradient regulation 3 0.08 Archaeplastida
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 Archaeplastida
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 Archaeplastida
AT4G31850 PGR3 proton gradient regulation 3 0.06 LandPlants
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 LandPlants
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.02 SeedPlants
AT4G31850 PGR3 proton gradient regulation 3 0.06 SeedPlants
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 SeedPlants
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 733 758
IPR002885 Pentatricopeptide_repeat 767 794
IPR002885 Pentatricopeptide_repeat 191 251
IPR002885 Pentatricopeptide_repeat 268 300
IPR002885 Pentatricopeptide_repeat 512 544
IPR002885 Pentatricopeptide_repeat 1076 1116
IPR002885 Pentatricopeptide_repeat 936 984
IPR002885 Pentatricopeptide_repeat 796 844
IPR002885 Pentatricopeptide_repeat 306 351
IPR002885 Pentatricopeptide_repeat 1006 1047
IPR002885 Pentatricopeptide_repeat 621 670
IPR002885 Pentatricopeptide_repeat 551 599
IPR002885 Pentatricopeptide_repeat 867 914
IPR002885 Pentatricopeptide_repeat 446 493
IPR002885 Pentatricopeptide_repeat 376 425
No external refs found!