Pnu_g14051 (VPS28-1)

Aliases : VPS28-1

Description : component *(VPS28) of ESCRT-I complex & original description: none

Gene families : OG0005158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g14051

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10209	VPS28-2, VPS28-1	component *(VPS28) of ESCRT-I complex & original...	0.03	OrthoFinder output from all 47 species
Als_g45918	VPS28-2, VPS28-1	component *(VPS28) of ESCRT-I complex & original...	0.02	OrthoFinder output from all 47 species
Ceric.24G011900.1	VPS28-1, Ceric.24G011900	component *(VPS28) of ESCRT-I complex & original...	0.03	OrthoFinder output from all 47 species
Cre16.g678100	VPS28-2, VPS28-1	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.03	OrthoFinder output from all 47 species
Dcu_g06166	VPS28-1	component *(VPS28) of ESCRT-I complex & original...	0.03	OrthoFinder output from all 47 species
MA_10432906g0010	VPS28-2, VPS28-1	component VPS28 of ESCRT-I complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007143	Vps28	101	286

External Links

No external refs found!