AMTR_s00041p00213780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.225

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana


Gene families : OG_01_0008916 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008916_tree ,
OG_02_0008631 (LandPlants) Phylogenetic Tree(s): OG_02_0008631_tree ,
OG_03_0005597 (SeedPlants) Phylogenetic Tree(s): OG_03_0005597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00213780
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00206930 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00207460 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00209130 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00041p00216270 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os01g02500.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00041p00206930 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 LandPlants
AMTR_s00041p00207460 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 LandPlants
AMTR_s00041p00209130 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 LandPlants
AMTR_s00041p00216270 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 LandPlants
LOC_Os01g02500.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 LandPlants
AMTR_s00041p00206930 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 SeedPlants
AMTR_s00041p00207460 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 SeedPlants
AMTR_s00041p00209130 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 SeedPlants
AMTR_s00041p00215470 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 SeedPlants
AMTR_s00041p00216270 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000120 Amidase 45 109
No external refs found!