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  5. AMTR_s00041p00213600

AMTR_s00041p00213600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.224

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana


Gene families : OG_01_0001344 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001344_tree ,
OG_02_0001222 (LandPlants) Phylogenetic Tree(s): OG_02_0001222_tree ,
OG_03_0000752 (SeedPlants) Phylogenetic Tree(s): OG_03_0000752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00213600
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00211300 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00041p00216070 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01024065001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024070001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_24946 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_24947 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g10410.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g10460.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g10640.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os10g06710.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo172412 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g111220.3.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 Archaeplastida
AMTR_s00041p00211300 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00041p00216070 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 LandPlants
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 LandPlants
AT4G34880 No alias Amidase family protein 0.02 LandPlants
GSVIVT01024070001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 LandPlants
LOC_Os04g10410.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os04g10640.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.01 LandPlants
LOC_Os06g16030.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.01 LandPlants
LOC_Os10g06710.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 LandPlants
AMTR_s00041p00211300 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 SeedPlants
AMTR_s00041p00216070 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 SeedPlants
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 SeedPlants
LOC_Os06g16030.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.01 SeedPlants
LOC_Os10g06710.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 SeedPlants
Solyc11g071550.2.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000120 Amidase 42 115
No external refs found!