1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g36746

Als_g36746 (ATVAMP711, VAMP711)


Aliases : ATVAMP711, VAMP711

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g36746
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00144870 ATVAMP711,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
AT4G32150 ATVAMP711, VAMP711 vesicle-associated membrane protein 711 0.04 OrthoFinder output from all 47 species
Adi_g033637 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Aop_g28673 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Ehy_g03359 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g04622 ATVAMP712, VAMP712 R-type VAMP7-group component of SNARE longin membrane... 0.05 OrthoFinder output from all 47 species
Sam_g08656 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Spa_g00633 ATVAMP712, VAMP712 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e024278_P001 VAMP714,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 83 144
IPR010908 Longin_dom 2 67
No external refs found!