AMTR_s00041p00212520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.220

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana


Gene families : OG_01_0001344 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001344_tree ,
OG_02_0001222 (LandPlants) Phylogenetic Tree(s): OG_02_0001222_tree ,
OG_03_0000752 (SeedPlants) Phylogenetic Tree(s): OG_03_0000752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00212520
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00211300 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00041p00218480 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00041p00211300 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 LandPlants
AMTR_s00041p00218480 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 LandPlants
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 LandPlants
AMTR_s00041p00211300 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 SeedPlants
AMTR_s00041p00218480 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 SeedPlants
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000120 Amidase 6 36
No external refs found!