Als_g36035 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB

Description : not classified & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g36035

Target Alias Description ECC score Gene Family Method Actions
AT3G61050 NTMC2TYPE4, NTMC2T4 Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
AT5G04220 NTMC2T1.3, SYT3,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 OrthoFinder output from all 47 species
Aev_g01130 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37860 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ala_g17634 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44290.t1 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G110500.1 NTMC2TYPE4,... not classified & original description: pacid=50591328... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36770.3 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species
Lfl_g23775 NTMC2T1.2, SYTB,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426986g0010 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g04670.1 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g02454 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32127 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60838 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017940 NTMC2TYPE4, NTMC2T4 not classified & original description: CDS=34-1614 0.03 OrthoFinder output from all 47 species
Sam_g19845 No alias membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 73 173
No external refs found!