Als_g36033 (RABA4D, ATRABA4D)

Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase & original description: none

Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g36033
Cluster	HCCA: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method
AT3G12160	RABA4D, ATRABA4D	RAB GTPase homolog A4D	0.02	OrthoFinder output from all 47 species
Adi_g011064	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G065400.1	RABA4D,...	A-class RAB GTPase & original description:...	0.04	OrthoFinder output from all 47 species
MA_59492g0010	RABA4D, ATRABA4D	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	13	173

External Links

No external refs found!