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  5. Als_g36023

Als_g36023 (SIP1;1, SIP1A)


Aliases : SIP1;1, SIP1A

Description : small basic intrinsic protein *(SIP) & original description: none


Gene families : OG0002162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g36023
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Adi_g007566 SIP1;1, SIP1A small basic intrinsic protein *(SIP) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050912 SIP1;1, SIP1A small basic intrinsic protein *(SIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05608 SIP1B, SIP1;2 small basic intrinsic protein *(SIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G000800.1 SIP1;1, SIP1A,... small basic intrinsic protein *(SIP) & original... 0.01 OrthoFinder output from all 47 species
Cre01.g038800 No alias Solute transport.channels.MIP family.small basic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 49 219
No external refs found!