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  5. Als_g35911

Als_g35911 (emb1354, CDC48C)


Aliases : emb1354, CDC48C

Description : not classified & original description: none


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g35911

Target Alias Description ECC score Gene Family Method Actions
Adi_g035605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04710 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32745 No alias platform ATPase CDC48 & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03992 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13016 CIP111 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g34787 CDC48A, CDC48, ATCDC48 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g32022 CDC48A, CDC48, ATCDC48 platform ATPase CDC48 & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g28061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012761_P001 Zm00001e012761 platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0009277 fungal-type cell wall IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 42 96
No external refs found!