Pnu_g13830 (VCS)


Aliases : VCS

Description : scaffold component *(VCS) of mRNA decapping complex & original description: none


Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13830

Target Alias Description ECC score Gene Family Method Actions
Adi_g071662 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15285 VCS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09838.t1 VCR, Aspi01Gene09838 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14625.t1 Aspi01Gene14625 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58197.t1 VCR, Aspi01Gene58197 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14873 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Cba_g74923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07954 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Gb_04906 VCS scaffold component VCS of mRNA decapping complex 0.02 OrthoFinder output from all 47 species
Msp_g26178 VCR scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g03283 VCS scaffold component *(VCS) of mRNA decaPping complex &... 0.02 OrthoFinder output from all 47 species
Sam_g16345 No alias scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species
Spa_g31000 VCR not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08563 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.04 OrthoFinder output from all 47 species
Tin_g24736 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 418 451
IPR032401 EDC4_WD40 255 369
No external refs found!