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  5. Pnu_g13805

Pnu_g13805


Description : regulatory protein *(TIC) of circadian clock & original description: none


Gene families : OG0000917 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13805

Target Alias Description ECC score Gene Family Method Actions
AT3G22380 TIC time for coffee 0.03 OrthoFinder output from all 47 species
Adi_g071489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12419 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03211 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Dcu_g45949 No alias regulatory protein *(TIC) of circadian clock & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01017938001 TIC Multi-process regulation.circadian clock.TIC circadian... 0.04 OrthoFinder output from all 47 species
LOC_Os07g38360.2 TIC, LOC_Os07g38360 circadian clock regulator (TIC) 0.04 OrthoFinder output from all 47 species
MA_41397g0010 TKL, ATTKL circadian clock regulator (TIC) 0.03 OrthoFinder output from all 47 species
Mp4g11470.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g04817 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Sam_g25564 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Solyc09g075830.3.1 TIC, Solyc09g075830 circadian clock regulator (TIC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!