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  5. Als_g33530

Als_g33530 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g33530

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene28631.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G030700.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50606093... 0.01 OrthoFinder output from all 47 species
GSVIVT01019824001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48130.1 ATRBL6, RBL6,... protease (RBL) 0.02 OrthoFinder output from all 47 species
Pir_g12850 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.03 OrthoFinder output from all 47 species
Sam_g13475 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo84059 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Solyc06g005580.4.1 RBL1, ATRBL1,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Zm00001e002140_P002 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 85 227
No external refs found!