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  5. Als_g33257

Als_g33257 (ATNAP1, ATABC1, ABC1, LAF6)


Aliases : ATNAP1, ATABC1, ABC1, LAF6

Description : component *(SUF-B) of plastidial SUF system assembly phase & original description: none


Gene families : OG0003465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g33257

Target Alias Description ECC score Gene Family Method Actions
AT4G04770 ATNAP1, ATABC1,... ATP binding cassette protein 1 0.05 OrthoFinder output from all 47 species
Adi_g113695 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
Aob_g06605 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Aop_g04268 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
Cba_g08367 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Ceric.24G058200.1 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
Cre15.g643600 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 OrthoFinder output from all 47 species
Dac_g07409 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
GSVIVT01012742001 ATNAP1, ATABC1,... UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Lfl_g03265 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Msp_g00614 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Nbi_g00957 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Ppi_g16641 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.07 OrthoFinder output from all 47 species
Smo170465 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032859 KH_dom-like 877 958
IPR045595 SufBD_N 209 273
IPR000825 SUF_FeS_clus_asmbl_SufBD 291 482
IPR006073 GTP-bd 697 818
IPR006073 GTP-bd 489 636
No external refs found!