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  5. Als_g33196

Als_g33196 (CTS, ACN2, PED3, AtABCD1, PXA1)


Aliases : CTS, ACN2, PED3, AtABCD1, PXA1

Description : subfamily ABCD transporter & original description: none


Gene families : OG0003180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g33196
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene50290.t1 CTS, ACN2, PED3,... subfamily ABCD transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g055120.3.1 CTS, ACN2, PED3,... peroxisomal fatty acid transporter (PXA1). subfamily... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 472 617
IPR011527 ABC1_TM_dom 94 362
IPR011527 ABC1_TM_dom 751 1017
IPR003439 ABC_transporter-like_ATP-bd 1133 1299
No external refs found!