Als_g32770 (PUB15)

Aliases : PUB15

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g32770
Cluster	HCCA: Cluster_248

Target	Alias	Description	ECC score	Gene Family Method
Als_g30969	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g11371	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g19134	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19342.t1	PUB26, Aspi01Gene19342	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19350.t1	PUB26, Aspi01Gene19350	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27391.t1	PUB26, Aspi01Gene27391	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene33499.t1	PUB25, Aspi01Gene33499	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene55033.t1	PUB25, Aspi01Gene55033	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g13740.1	LOC_Os03g13740	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os10g03440.1	LOC_Os10g03440	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os12g06410.1	PUB24, LOC_Os12g06410	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10433846g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_126399g0010	PUB26	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_52661g0010	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Zm00001e041397_P001	PUB23, Zm00001e041397	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006952	defense response	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	9	80

External Links

No external refs found!

Als_g32770 (PUB15)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation