Als_g32467


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g32467

Target Alias Description ECC score Gene Family Method Actions
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 OrthoFinder output from all 47 species
Aev_g21991 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03214 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29010 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05734 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70862 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009250 DOT4 not classified & original description: CDS=1-1692 0.05 OrthoFinder output from all 47 species
Azfi_s0292.g063413 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2286 0.05 OrthoFinder output from all 47 species
Cba_g01506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g70891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26743 No alias component *(MED19) of head module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g22711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Msp_g33982 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06227 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g24053 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13330 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005911 EMB2758 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo82024 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23950 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g11710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 175 200
IPR002885 Pentatricopeptide_repeat 75 99
IPR002885 Pentatricopeptide_repeat 100 147
IPR002885 Pentatricopeptide_repeat 1 46
No external refs found!