HCCA BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA MF GO:0043021 ribonucleoprotein complex binding IEP HCCA MF GO:0043022 ribosome binding IEP HCCA BP GO:0043043 peptide biosynthetic process IEP HCCA CC GO:0043226 organelle IEP HCCA CC GO:0043228 non-membrane-bounded organelle IEP HCCA CC GO:0043229 intracellular organelle IEP HCCA CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA BP GO:0043603 amide metabolic process IEP HCCA BP GO:0043604 amide biosynthetic process IEP HCCA BP GO:0044249 cellular biosynthetic process IEP HCCA BP GO:0044260 cellular macromolecule metabolic process IEP HCCA BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA MF GO:0044877 protein-containing complex binding IEP HCCA MF GO:0045182 translation regulator activity IEP HCCA BP GO:0045727 positive regulation of translation IEP HCCA BP GO:0045901 positive regulation of translational elongation IEP HCCA BP GO:0045905 positive regulation of translational termination IEP HCCA BP GO:0048518 positive regulation of biological process IEP HCCA BP GO:0048522 positive regulation of cellular process IEP HCCA BP GO:0051128 regulation of cellular component organization IEP HCCA BP GO:0051130 positive regulation of cellular component organization IEP HCCA BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA BP GO:0051246 regulation of protein metabolic process IEP HCCA BP GO:0051247 positive regulation of protein metabolic process IEP HCCA MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA BP GO:1901576 organic substance biosynthetic process IEP HCCA BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002906 Ribosomal_S27a 102 147
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!
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  4. Sequence
  5. Pnu_g13549

Pnu_g13549 (UVR8)


Aliases : UVR8

Description : photoreceptor *(UVR8) & original description: none


Gene families : OG0001540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13549
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0509.g074711 UVR8 photoreceptor *(UVR8) & original description: CDS=1-1527 0.04 OrthoFinder output from all 47 species
Ceric.38G035100.1 UVR8, Ceric.38G035100 photoreceptor *(UVR8) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.7 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Mp2g11590.1 UVR8 photoreceptor (UVR8) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 244 292
IPR000408 Reg_chr_condens 140 188
IPR000408 Reg_chr_condens 296 344
IPR000408 Reg_chr_condens 35 83
IPR000408 Reg_chr_condens 90 136
IPR000408 Reg_chr_condens 349 384
IPR000408 Reg_chr_condens 192 240
No external refs found!