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  5. Als_g32334

Als_g32334 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g32334

Target Alias Description ECC score Gene Family Method Actions
Adi_g018652 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019651 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025362 No alias not classified & original description: CDS=1-987 0.03 OrthoFinder output from all 47 species
Cba_g37743 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43119 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g13260.1 MBD05, MBD5, ATMBD5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g26548 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 433 481
No external refs found!