Gb_22168


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0001628 (LandPlants) Phylogenetic Tree(s): OG_02_0001628_tree ,
OG_03_0001153 (SeedPlants) Phylogenetic Tree(s): OG_03_0001153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22168
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT5G47160 No alias YDG/SRA domain-containing protein 0.03 Archaeplastida
Cre02.g089200 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.01 Archaeplastida
GSVIVT01005913001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
GSVIVT01025844001 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 Archaeplastida
GSVIVT01027942001 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
LOC_Os01g59620.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os05g41172.2 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os11g38900.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
MA_95753g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e033130_P002 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
AMTR_s00008p00103090 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.01 SeedPlants
GSVIVT01005913001 No alias Chromatin organisation.histone modifications.histone... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 822 955
IPR003105 SRA_YDG 515 678
IPR007728 Pre-SET_dom 706 803
No external refs found!