AMTR_s00041p00192380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.165

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0001074 (LandPlants) Phylogenetic Tree(s): OG_02_0001074_tree ,
OG_03_0000731 (SeedPlants) Phylogenetic Tree(s): OG_03_0000731_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00192380
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT4G31450 No alias RING/U-box superfamily protein 0.02 Archaeplastida
LOC_Os01g47740.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 225 269
No external refs found!