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  5. Als_g30897

Als_g30897


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30897

Target Alias Description ECC score Gene Family Method Actions
AT3G27860 No alias Tudor/PWWP/MBT superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11396 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49342.t1 Aspi01Gene49342 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.03 OrthoFinder output from all 47 species
Dac_g32171 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g33929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03857 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g086750.3.1 Solyc02g086750 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21921 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 394 477
No external refs found!