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  5. Als_g30881

Als_g30881 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30881

Target Alias Description ECC score Gene Family Method Actions
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044446 No alias not classified & original description: CDS=1-741 0.03 OrthoFinder output from all 47 species
Cba_g67470 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G076800.1 Ceric.13G076800 not classified & original description: pacid=50635128... 0.03 OrthoFinder output from all 47 species
Dac_g01356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25885 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0189.g025174 No alias not classified & original description: CDS=1-1665 0.03 OrthoFinder output from all 47 species
Spa_g23974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17781 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0060632 regulation of microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 121
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 49 69
IPR002885 Pentatricopeptide_repeat 151 173
IPR002885 Pentatricopeptide_repeat 251 273
IPR002885 Pentatricopeptide_repeat 351 374
IPR046848 E_motif 393 453
No external refs found!