Als_g30844 (ATUPF3, UPF3)

Aliases : ATUPF3, UPF3

Description : component *(UPF3) of RNA quality control Exon Junction complex & original description: none

Gene families : OG0002175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002175_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g30844

Target	Alias	Description	ECC score	Gene Family Method
Aop_g09824	ATUPF3, UPF3	component *(UPF3) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Cba_g38478	ATUPF3, UPF3	component *(UPF3) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Cba_g59737	ATUPF3, UPF3	component *(UPF3) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Nbi_g05881	ATUPF3, UPF3	component *(UPF3) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Solyc01g103420.4.1	ATUPF3, UPF3,...	component UPF3 of RNA quality control Exon Junction complex	0.02	OrthoFinder output from all 47 species
Tin_g09311	ATUPF3, UPF3	component *(UPF3) of RNA quality control Exon Junction...	0.04	OrthoFinder output from all 47 species
Zm00001e008047_P001	ATUPF3, UPF3,...	component UPF3 of RNA quality control Exon Junction complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005120	UPF3_dom	72	237

External Links

No external refs found!