Als_g30602


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30602

Target Alias Description ECC score Gene Family Method Actions
Adi_g012573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0046.g030124 No alias not classified & original description: CDS=1-2364 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.04 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s0541.g076347 No alias not classified & original description: CDS=106-2673 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g06550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.23G005700.1 Ceric.23G005700 not classified & original description: pacid=50611427... 0.03 OrthoFinder output from all 47 species
Ceric.25G001500.1 Ceric.25G001500 not classified & original description: pacid=50593180... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.05 OrthoFinder output from all 47 species
Dac_g13741 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22932 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28478 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43486 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23501 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08688 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10096 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 124
IPR002885 Pentatricopeptide_repeat 871 916
IPR002885 Pentatricopeptide_repeat 408 454
IPR002885 Pentatricopeptide_repeat 525 572
IPR002885 Pentatricopeptide_repeat 296 342
IPR002885 Pentatricopeptide_repeat 179 217
IPR002885 Pentatricopeptide_repeat 753 799
IPR002885 Pentatricopeptide_repeat 641 668
IPR002885 Pentatricopeptide_repeat 499 523
IPR002885 Pentatricopeptide_repeat 844 868
No external refs found!