Als_g30303


Description : nucleoporin of nuclear pore complex *(NUP1/NUP136) & original description: none


Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30303

Target Alias Description ECC score Gene Family Method Actions
Ala_g06113 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene07485.t1 Aspi01Gene07485 nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Cba_g14237 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.02 OrthoFinder output from all 47 species
Dac_g06530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034601001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
MA_87384g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g05990.1 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Msp_g35297 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.03 OrthoFinder output from all 47 species
Msp_g48013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025168 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.03 OrthoFinder output from all 47 species
Sam_g13887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06717 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Spa_g09277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06136 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Zm00001e005928_P001 Zm00001e005928 NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!