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  5. Als_g29961

Als_g29961


Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29961

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00256280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00200410 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT3G53890 No alias Ribosomal protein S21e 0.05 OrthoFinder output from all 47 species
Aop_g23096 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s2932.g113764 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.14 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre03.g203450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01017756001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_27652 No alias component RPS21 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_35516 No alias component RPS21 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_73657g0010 No alias component RPS21 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pp3c26_3000V3.1 Pp3c26_3000 Ribosomal protein S21e 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020026 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 22 97
No external refs found!