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  5. Als_g29786

Als_g29786


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29786
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Adi_g024352 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077336 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10404 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33221 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42730 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13654.t1 Aspi01Gene13654 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32259.t1 Aspi01Gene32259 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Len_g56258 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63607 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c13_11088V3.1 Pp3c13_11088 No annotation 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002735 No alias PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Smo410393 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
Solyc02g036130.3.1 Solyc02g036130 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc07g049120.2.1 Solyc07g049120 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e007100_P003 Zm00001e007100 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 76 151
No external refs found!