Als_g29508 (GYRA)

Aliases : GYRA

Description : subunit A of DNA gyrase complex & original description: none

Gene families : OG0005091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005091_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g29508
Cluster	HCCA: Cluster_205

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00135690	GYRA,...	Cell cycle.organelle machineries.DNA replication.DNA...	0.02	OrthoFinder output from all 47 species
Cre04.g221650	GYRA	Cell cycle.organelle machineries.DNA replication.DNA...	0.01	OrthoFinder output from all 47 species
Dcu_g04074	GYRA	subunit A of DNA gyrase complex & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g03966	GYRA	subunit A of DNA gyrase complex & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01027314001	GYRA	Cell cycle.organelle machineries.DNA replication.DNA...	0.03	OrthoFinder output from all 47 species
MA_10428662g0010	GYRA	subunit A of DNA gyrase complex	0.04	OrthoFinder output from all 47 species
Nbi_g01387	GYRA	subunit A of DNA gyrase complex & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14125	GYRA	subunit A of DNA gyrase complex & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g15027	GYRA	subunit A of DNA gyrase complex & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e011789_P002	GYRA, Zm00001e011789	subunit A of DNA gyrase complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003916	DNA topoisomerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006265	DNA topological change	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0017069	snRNA binding	IEP	HCCA
MF	GO:0017070	U6 snRNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002205	Topo_IIA_dom_A	172	607
IPR006691	GyrA/parC_rep	924	971
IPR006691	GyrA/parC_rep	752	795
IPR006691	GyrA/parC_rep	800	849
IPR006691	GyrA/parC_rep	865	912
IPR006691	GyrA/parC_rep	696	746
IPR006691	GyrA/parC_rep	648	692

External Links

No external refs found!

Als_g29508 (GYRA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation