Als_g29315


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g003682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g077986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56297.t1 Aspi01Gene56297 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Ceric.26G072500.1 Ceric.26G072500 not classified & original description: pacid=50600348... 0.03 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.12 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 OrthoFinder output from all 47 species
Zm00001e033372_P001 Zm00001e033372 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!