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  5. Als_g29313

Als_g29313


Description : not classified & original description: none


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29313

Target Alias Description ECC score Gene Family Method Actions
AT1G48650 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
Cre12.g492450 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g09821 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_40990 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g02413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430562g0020 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10432908g0020 No alias DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.07 OrthoFinder output from all 47 species
Msp_g48089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014244 No alias not classified & original description: CDS=5030-5773 0.04 OrthoFinder output from all 47 species
Sam_g14582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g007510.4.1 Solyc04g007510 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 44 199
IPR007502 Helicase-assoc_dom 495 582
IPR011709 DEAD-box_helicase_OB_fold 653 734
IPR001650 Helicase_C 303 431
No external refs found!