Als_g29262


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29262

Target Alias Description ECC score Gene Family Method Actions
AT3G05430 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g017529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G099500.1 Ceric.04G099500 not classified & original description: pacid=50631612... 0.04 OrthoFinder output from all 47 species
Dcu_g08295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_137318g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02506 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 630 713
No external refs found!