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  5. Als_g29246

Als_g29246


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G33680 No alias KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g105498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre06.g250800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_04922 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_17340 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g13130.1 LOC_Os02g13130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01930.1 LOC_Os08g01930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434164g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000424 No alias not classified & original description: CDS=117-1961 0.03 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g39488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07129 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 289 354
IPR004088 KH_dom_type_1 384 448
No external refs found!