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Aliases : LINC2
Description : nuclear lamina lamin-like protein *(CRWN) & original description: none
Gene families : OG0002096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G67230 | LINC1 | little nuclei1 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G65770 | LINC4 | little nuclei4 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G65780 | ATBCAT-5 | branched-chain amino acid aminotransferase 5 /... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g018491 | LINC3 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g055294 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g06792 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07969 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g06258 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010369 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G023500.1 | LINC2, Ceric.07G023500 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g16168 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23399 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09858 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g07133 | LINC1 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13504 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011972001 | LINC3 | Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01031076001 | LINC1 | Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g56140.1 | LINC4, LOC_Os01g56140 | CRWN nuclear lamina lamin-like protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g48010.1 | LINC1, LOC_Os02g48010 | CRWN nuclear lamina lamin-like protein | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26620 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g03849 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10182 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19679 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28255 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0112.g020733 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14580 | No alias | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g091960.4.1 | LINC4, Solyc02g091960 | CRWN nuclear lamina lamin-like protein | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26205 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019705_P002 | LINC4, Zm00001e019705 | CRWN nuclear lamina lamin-like protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0031491 | nucleosome binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |