Als_g29063 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29063

Target Alias Description ECC score Gene Family Method Actions
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37820 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26681 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67392 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G043400.1 Ceric.03G043400 not classified & original description: pacid=50571475... 0.03 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19069 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48726 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13340 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005803 No alias not classified & original description: CDS=32-2446 0.04 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 336 361
IPR002885 Pentatricopeptide_repeat 566 596
IPR002885 Pentatricopeptide_repeat 606 630
IPR002885 Pentatricopeptide_repeat 538 562
IPR002885 Pentatricopeptide_repeat 638 663
IPR046849 Eplus_motif 748 771
IPR002885 Pentatricopeptide_repeat 462 509
IPR002885 Pentatricopeptide_repeat 159 206
IPR002885 Pentatricopeptide_repeat 261 307
IPR002885 Pentatricopeptide_repeat 362 409
IPR032867 DYW_dom 779 870
IPR046848 E_motif 681 743
No external refs found!