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  5. Als_g28880

Als_g28880


Description : not classified & original description: none


Gene families : OG0000659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00230320 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G32340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G20190 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0161.g054089 No alias not classified & original description: CDS=300-1514 0.03 OrthoFinder output from all 47 species
Azfi_s0343.g065741 No alias not classified & original description: CDS=55-852 0.03 OrthoFinder output from all 47 species
Dcu_g33575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013133001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g03023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426506g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432283g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_96077g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp7g12440.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003146 No alias not classified & original description: CDS=1-1278 0.03 OrthoFinder output from all 47 species
Spa_g07746 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!