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  5. Als_g28492

Als_g28492


Description : not classified & original description: none


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28492
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Adi_g059012 emb2746 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g063546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g087396 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16838 emb2746 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42307.t1 emb2746, Aspi01Gene42307 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12241 emb2746 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025361 No alias not classified & original description: CDS=1-1569 0.03 OrthoFinder output from all 47 species
Tin_g09016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 413 494
IPR044822 Myb_DNA-bind_4 151 234
No external refs found!