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  5. Als_g28206

Als_g28206


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28206

Target Alias Description ECC score Gene Family Method Actions
Cre10.g442750 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc03g026150.3.1 BB2, BB, Solyc03g026150 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g062260.3.1 BB2, BB, Solyc11g062260 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 243 285
No external refs found!