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  5. Pnu_g13094

Pnu_g13094


Description : component *(CWC21) of MAC spliceosome-associated complex & original description: none


Gene families : OG0003203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13094

Target Alias Description ECC score Gene Family Method Actions
AT3G23900 No alias RNA recognition motif (RRM)-containing protein 0.02 OrthoFinder output from all 47 species
Als_g03832 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Als_g53039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17747 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015475 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Cba_g27324 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Dcu_g46607 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Dde_g00853 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Lfl_g04122 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
MA_71038g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g23093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25947 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Ppi_g10244 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Solyc09g092250.3.1 Solyc09g092250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025611_P001 Zm00001e025611 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 357 417
IPR017868 Filamin/ABP280_repeat-like 87 185
No external refs found!