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  5. Als_g27840

Als_g27840 (RPE, EMB2728)


Aliases : RPE, EMB2728

Description : EC_5.1 racemase or epimerase & original description: none


Gene families : OG0004751 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g27840
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00063510 RPE, EMB2728,... Photosynthesis.calvin cycle.phosphopentose epimerase 0.02 OrthoFinder output from all 47 species
Aev_g14485 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14486 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01466 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32397 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07259 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18480.t1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08756 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G052500.1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g15437 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g14724 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007976001 RPE, EMB2728 Photosynthesis.calvin cycle.phosphopentose epimerase 0.04 OrthoFinder output from all 47 species
LOC_Os03g07300.1 RPE, EMB2728,... phosphopentose epimerase 0.03 OrthoFinder output from all 47 species
Len_g19382 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06506 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11661 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g05510 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g19497 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06182 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g61783 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115820.3.1 RPE, EMB2728,... phosphopentose epimerase 0.03 OrthoFinder output from all 47 species
Spa_g28901 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g40504 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g16249 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 64 262
No external refs found!