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  5. Pnu_g13076

Pnu_g13076


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13076

Target Alias Description ECC score Gene Family Method Actions
Dcu_g22999 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_47951g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Pir_g35967 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g056510.3.1 Solyc12g056510 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Tin_g31947 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000092_P003 AT-GTL1, GTL1,... transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Zm00001e012540_P001 Zm00001e012540 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 506 593
IPR044822 Myb_DNA-bind_4 194 280
No external refs found!