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  5. Als_g27358

Als_g27358 (MURE, PDE316, ATMURE)


Aliases : MURE, PDE316, ATMURE

Description : cofactor of plastid-encoded RNA polymerase *(PAP11/MURE) & original description: none


Gene families : OG0004194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g27358
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Adi_g008965 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.06 OrthoFinder output from all 47 species
Ala_g02348 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Als_g09620 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
Dcu_g13192 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Nbi_g12757 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Ore_g33830 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
Sam_g23643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04718 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 203 408
IPR004101 Mur_ligase_C 429 512
IPR000713 Mur_ligase_N 116 191
No external refs found!