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  5. Als_g27095

Als_g27095


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g27095
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00033540 evm_27.TU.AmTr_v1... Patellin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g108119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G082700.1 Ceric.12G082700 not classified & original description: pacid=50602324... 0.06 OrthoFinder output from all 47 species
Ceric.37G040600.1 Ceric.37G040600 not classified & original description: pacid=50615839... 0.01 OrthoFinder output from all 47 species
Dac_g20291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008144 No alias not classified & original description: CDS=1-1644 0.03 OrthoFinder output from all 47 species
Smo90159 No alias Patellin-6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc09g015080.3.1 Solyc09g015080 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g10538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 161 190
IPR001251 CRAL-TRIO_dom 216 363
No external refs found!