1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g12996

Pnu_g12996


Description : clathrin uncoating protein *(AUL) & original description: none


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12996

Target Alias Description ECC score Gene Family Method Actions
AT1G75100 JAC1 J-domain protein required for chloroplast accumulation response 1 0.03 OrthoFinder output from all 47 species
Als_g13965 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0330.g065367 No alias clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g33427 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G032400.1 Ceric.07G032400 clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02857 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021545001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
MA_33378g0010 No alias clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
Mp3g09960.1 No alias clathrin uncoating protein (AUL) 0.04 OrthoFinder output from all 47 species
Pnu_g04972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005621 No alias clathrin uncoating protein *(AUL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020995 AUL1 clathrin uncoating protein *(AUL) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024209 No alias clathrin uncoating protein *(AUL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g26480 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47514 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21854 No alias clathrin uncoaTing protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!