Pnu_g12959


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12959

Target Alias Description ECC score Gene Family Method Actions
AT2G22600 No alias RNA-binding KH domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g016415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g092270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16566 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61202 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Aob_g06699 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015632 No alias not classified & original description: CDS=147-1991 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.02 OrthoFinder output from all 47 species
Cba_g07160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G028300.1 Ceric.32G028300 not classified & original description: pacid=50598029... 0.03 OrthoFinder output from all 47 species
Dac_g02274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011439001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
GSVIVT01019958001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Lfl_g03080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10433640g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05810 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc03g082980.3.1 Solyc03g082980 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc04g077060.3.1 Solyc04g077060 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Spa_g30529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36753 PEP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 394 444
IPR004088 KH_dom_type_1 660 722
IPR004088 KH_dom_type_1 190 258
IPR004088 KH_dom_type_1 44 94
IPR004088 KH_dom_type_1 477 534
No external refs found!