Als_g26320

Description : not classified & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g26320

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00217990	evm_27.TU.AmTr_v1...	U-box domain-containing protein 16 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT1G60190	No alias	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
Als_g16594	PUB14, ATPUB14	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g31832	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17483	PUB15	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g32107	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene33577.t1	PUB14, ATPUB14,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene43158.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene44183.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene44184.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene44185.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.26G012900.1	Ceric.26G012900	not classified & original description: pacid=50598948...	0.03	OrthoFinder output from all 47 species
Ehy_g02654	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11164	PUB12, AtPUB12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021265001	ATPUB17, PUB17	U-box domain-containing protein 17 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_08792	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula...	0.04	OrthoFinder output from all 47 species
Gb_20805	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Gb_24091	PUB9, ATPUB9	U-box domain-containing protein 14 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10431607g0010	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula...	0.02	OrthoFinder output from all 47 species
MA_69133g0010	PUB14, ATPUB14	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Ore_g05165	ATPUB17, PUB17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20708	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35149	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g02760	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17953	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003607	ATPUB17, PUB17	not classified & original description: CDS=1-2595	0.03	OrthoFinder output from all 47 species
Smo75609	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula	0.02	OrthoFinder output from all 47 species
Solyc03g114160.1.1	Solyc03g114160	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc04g082440.4.1	PUB15, Solyc04g082440	U-box domain-containing protein 15 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc06g076040.3.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Zm00001e014566_P002	PUB9, ATPUB9,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Zm00001e019429_P001	Zm00001e019429	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e028839_P001	Zm00001e028839	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e034012_P001	Zm00001e034012	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	436	471
IPR003613	Ubox_domain	297	367

External Links

No external refs found!

Als_g26320

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation