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  5. Pnu_g12870

Pnu_g12870


Description : not classified & original description: none


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12870
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.02 OrthoFinder output from all 47 species
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.03 OrthoFinder output from all 47 species
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.02 OrthoFinder output from all 47 species
AT1G49030 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
AT2G40935 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
AT5G35525 No alias PLAC8 family protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene13588.t1 Aspi01Gene13588 not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01011693001 PCR2 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61500.1 PCR2, LOC_Os03g61500 Cell number regulator 10 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os10g02300.3 LOC_Os10g02300 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
MA_40999g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g19030.1 No alias Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Ore_g32602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Solyc02g090730.3.1 PCR2, Solyc02g090730 Cell number regulator 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Solyc06g066590.4.1 Solyc06g066590 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e006266_P001 PCR11, Zm00001e006266 Cell number regulator 7 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 71 168
No external refs found!