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  5. Pnu_g12867

Pnu_g12867


Description : not classified & original description: none


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12867

Target Alias Description ECC score Gene Family Method Actions
AT1G18740 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Aob_g11017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28412.t1 BPS1, Aspi01Gene28412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G075000.1 Ceric.15G075000 not classified & original description: pacid=50640100... 0.03 OrthoFinder output from all 47 species
LOC_Os04g59140.1 LOC_Os04g59140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_69211g0010 ROH1 UPF0496 protein 4 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
Nbi_g10004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005897 No alias not classified & original description: CDS=1-1284 0.02 OrthoFinder output from all 47 species
Solyc12g056550.1.1 Solyc12g056550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 66 397
No external refs found!