AMTR_s00041p00154550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.107

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component


Gene families : OG_01_0005707 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005707_tree ,
OG_02_0006629 (LandPlants) Phylogenetic Tree(s): OG_02_0006629_tree ,
OG_03_0007957 (SeedPlants) Phylogenetic Tree(s): OG_03_0007957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00154550
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT1G56450 PBG1 20S proteasome beta subunit G1 0.03 Archaeplastida
Cpa|evm.model.tig00000808.43 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Cre06.g280850 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
LOC_Os09g33986.1 No alias component beta type-7 of 26S proteasome 0.03 Archaeplastida
MA_10427481g0010 No alias component beta type-7 of 26S proteasome 0.04 Archaeplastida
Pp3c18_13650V3.1 No alias 20S proteasome beta subunit G1 0.04 Archaeplastida
Smo271646 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
AT1G56450 PBG1 20S proteasome beta subunit G1 0.03 LandPlants
LOC_Os09g33986.1 No alias component beta type-7 of 26S proteasome 0.03 LandPlants
MA_10427481g0010 No alias component beta type-7 of 26S proteasome 0.04 LandPlants
Pp3c18_13650V3.1 No alias 20S proteasome beta subunit G1 0.04 LandPlants
Smo271646 No alias Protein degradation.26S proteasome.20S core... 0.03 LandPlants
Solyc11g069150.3.1 No alias component beta type-7 of 26S proteasome 0.02 LandPlants
Zm00001e034696_P001 No alias component beta type-7 of 26S proteasome 0.02 LandPlants
AT1G56450 PBG1 20S proteasome beta subunit G1 0.02 SeedPlants
LOC_Os09g33986.1 No alias component beta type-7 of 26S proteasome 0.03 SeedPlants
MA_10427481g0010 No alias component beta type-7 of 26S proteasome 0.04 SeedPlants
Solyc11g069150.3.1 No alias component beta type-7 of 26S proteasome 0.02 SeedPlants
Zm00001e034696_P001 No alias component beta type-7 of 26S proteasome 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 213
No external refs found!