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  5. Pnu_g12798

Pnu_g12798 (MBD10)


Aliases : MBD10

Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12798

Target Alias Description ECC score Gene Family Method Actions
Adi_g015581 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022930 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058503 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12613.t1 Aspi01Gene12613 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46224.t1 Aspi01Gene46224 methylation reader *(MBD10-11) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene70540.t1 MBD10, Aspi01Gene70540 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00453 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05333 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06795 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06566 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Smo437471 MBD10 Methyl-CpG-binding domain-containing protein 10... 0.03 OrthoFinder output from all 47 species
Spa_g30857 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 21 84
No external refs found!